Root distribution

Warning

This page is a work in progress. If you have any questions or notice any errors, please raise an issue.

Overview

The vertical distribution of plant roots determines the soil profile from which a plant extracts water and nutrients. Root distributions are typically concentrated near the surface (where nutrient availability is highest) but extend to depth to access water during drier periods.

The root distribution can be described as a density function over the vertical (elevation) coordinate $z$ (m),

\[\begin{equation} r(z) = \frac{\partial R}{\partial z} \end{equation}\]

where $R(z)$ is the cumulative fraction of roots from the surface to $z$. The total roots integrate to unity: $\int_0^{z_{\max}} r(z) \, dz = 1$. Since the soil layers

subtypes(Terrarium.AbstractRootDistribution)
1-element Vector{Any}:
 StaticExponentialRootDistribution

Static exponential root distribution

A common choice for $r(z)$ is the average of two exponential distributions with different depth scales following [6],

\[\begin{equation} r(z) = \frac{1}{2} \left[ a \exp(a z) + b \exp(b z) \right] \end{equation}\]

where $a$ and $b$ are empirical rate parameters controlling the depth e-folding scales (m⁻¹). The first parameter $a$ can be viewed as controlling shallow roots, while $b$ controls deeper root penetration. Larger values produce shallower distributions. Note that, in this formulation, we assume z to be decreasing with depth (negative below the surface).

Root distributions vary among plant functional types. Shallow-rooted plants (grasses, shrubs) may extract water almost entirely from the top soil layers, while deep-rooted trees access water at greater depths. These differences are captured through PFT-specific values of the rate parameters $a$ and $b$.

Terrarium.StaticExponentialRootDistributionType
struct StaticExponentialRootDistribution{NF} <: Terrarium.AbstractRootDistribution{NF}

Static vegetation root distribution implementation in PALADYN (Willeit 2016) based on the scheme proposed by Zeng (2001). The continuous density of the root distribution is modeled as

\[\frac{\partial R}{\partial z} = \frac{1}{2} \left[ a \exp(a z) + b \exp(b z) \right]\]

which is then integrated over the soil column and normalized to sum to unity. Note that this is effectively the average of two exponential distributions with rates a and b, both with units m⁻¹. The resulting CDF of this distribution determines the root distribution.

Properties:

  • a: First empirical rate parameter for root distribution

  • b: Second empirical rate parameter for root distribution

source
variables(StaticExponentialRootDistribution(Float32))
Variables
├─ Prognostic: 
├─ Auxiliary: 
├── root_fraction [-] on XYZ{Center, Center, Center}
├─ Inputs: 
├─ Namespaces:

Methods

Terrarium.root_densityFunction
root_density(::AbstractRootDistribution, z, args...)

Compute the continuous density function of the given root distirbution as a function of depth z. Note that this function must be integrated and normalized over the root zone in order to obtain the cumulative root fraction in each soil layer.

source

References

[6]
X. Zeng. Global Vegetation Root Distribution for Land Modeling. Journal of Hydrometeorology 2, 525–530 (2001).